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This Application aligns the sequence of a transcript with the respective genomic sequence (which may also differ from that of the transcript) in a neighborhood of a chosen position. The Application also aligns the translations of the genomic and transcript sequence (remember that they can be different). You can also enter the coordinates in hgvs variant format (eg c.45del). In this case, the varied nucleotide and amino acid sequences will also be shown (the differences will be indicated in red). HGVS with insertions or duplications or indels are used only for the position and the varied sequence is not aligned. |