AlignTranscript
( Align mRNA, Genomic and Protein Sequence )
by Ivano Zara
This Application aligns the sequence of a transcript with the respective genomic sequence (which may also differ from that of the transcript) in a neighborhood of a chosen position.
The Application also aligns the translations of the genomic and transcript sequence (remember that they can be different).
The alignments are shown only if the position falls on gene sequences.
Show
nt around the center
Genomic Release:
hg19
hg38
Center from Genomic position
Chromosome:
Pos:
optional if there is only one gene in this genomic position
Genename:
OR cDNA ID:
mandatory if multiple genes coexist on the same genomic position.
